Browse of TCMCG051C40319 protein

CDS

Accession Number	TCMCG051C40319
gbkey	CDS
Protein Id	XP_024440404.1
Location	complement(join(11686228..11686241,11686556..11686834,11688532..11688656,11688893..11689158,11689659..11689793,11689976..11690082,11690296..11690440,11690567..11690770,11690849..11690983,11691062..11691262,11691353..11691565,11691958..11692131,11692476..11692603,11692685..11692830,11692948..11693126,11693218..11693362,11693477..11693524,11693526..11693702,11693787..11693950,11694134..11694226,11694443..11694555,11694726..11694894,11694972..11695007))
Gene	LOC18105325
GeneID	18105325
Organism	Populus trichocarpa

Protein

Length	1132aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA17973
db_source	XM_024584636.1
Definition	LOW QUALITY PROTEIN: sister-chromatid cohesion protein 3 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category	D
Description	cohesion protein
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K06671        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04110        [VIEW IN KEGG] ko04111        [VIEW IN KEGG] ko04113        [VIEW IN KEGG] map04110        [VIEW IN KEGG] map04111        [VIEW IN KEGG] map04113        [VIEW IN KEGG]
GOs	GO:0000003        [VIEW IN EMBL-EBI] GO:0000280        [VIEW IN EMBL-EBI] GO:0000819        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005694        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007049        [VIEW IN EMBL-EBI] GO:0007059        [VIEW IN EMBL-EBI] GO:0007062        [VIEW IN EMBL-EBI] GO:0007127        [VIEW IN EMBL-EBI] GO:0007135        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008608        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0022402        [VIEW IN EMBL-EBI] GO:0022414        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045132        [VIEW IN EMBL-EBI] GO:0045143        [VIEW IN EMBL-EBI] GO:0045144        [VIEW IN EMBL-EBI] GO:0048285        [VIEW IN EMBL-EBI] GO:0051177        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0051316        [VIEW IN EMBL-EBI] GO:0051321        [VIEW IN EMBL-EBI] GO:0051455        [VIEW IN EMBL-EBI] GO:0051754        [VIEW IN EMBL-EBI] GO:0061982        [VIEW IN EMBL-EBI] GO:0061983        [VIEW IN EMBL-EBI] GO:0070192        [VIEW IN EMBL-EBI] GO:0070601        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0098813        [VIEW IN EMBL-EBI] GO:0140013        [VIEW IN EMBL-EBI] GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGACGACCACCCGGAAACTTCCCGAAACCGCTCTAAGAGGAAGAGGTCCAAGACCGAGACCGAGGAGAGAACGAGCGATGCGAATGAGGAGGTGGAGGAGCGCGGGGATGATTTCGAAGAGGTTCGCCCAAAATCTAAGCGTAACCGTGCTGCTAAGGATGCCACTTCCCCAGCCGTGCTCAATCCCGATCAAAGCTTGATCGATGTTATCAAAGGCAATGAGATACAAATTCCTCAGGTGGTGAAGCTTTGGGTTGAGCGATACGAGAAGGATCCAAAACAAGCAATGGTTGAACTCTTGACCACGCTGTTTGAGGCATGTGGAGCCAAATATCGTATCAAGAAAGAGTTGCTGGATGAGACTGATGTTGACGATGTTGTCGTTGCTCTTGTCAATCTTGCTAGAAATGGTGAGGTTGAAGATTATCAGGGTTCAAAACGGAAGGACTTCAAAAACTTTAAAGACAACCTCCTCTCATTCTGGGATAGTTTGATCGCTGAATGCCAAGATGGGCCACTTTTTGATAAGATGTTGTTTGACAAATGCATGGACTATATAATAGCATTATCATGCACTCCGCCAAGAGTTTACCGTCAAGTTGCATCCTTGATGGGGCTTCAACTTGTCACTTCATTCATAACGGTAGCTAAAGCGCTTGGTGCACAACGAGAAACTACTCAGAGACAGTTAAATGCTGAAAATAAGAAACGAACAGAAGGGCCTCGTTTGGAGTCCCTTAATAAAAGGTTTGATAAGATACTTGTACTAGAGGAAATGATGCGCAAAATATTTTCTGGGTTATTCGTGCATCGGTACCGGGATATTGATCCTAATATTCGAACATCATGCATTGAGTCTCTTGGTGTATGGGTTTTGTCATATCCATCACTTTTCTTGCAGGATTTATACTTAAAGTATCTTGGATGGACACTTAATGATAAAAATGCAGGTGTCAGAAAAGCATCTGTTCATGCATTGCAAAAACTTTATGACGCGGATGATAACGTGCCCACTCTCGGACTATTTACTGAAAGATTTTCCAACCGGATGATCGAACTTGCTGATGACAGTGATGTTAGTGTAGCTGTTTGTGCCATAGGACTTGTAAAACAATTACTCAGGCATCAGCTTTTACCTGATGATGACTTGGGTCCATTATATGATTTACTTATTGATGATCCAGCGGAAGTCAGGCGTGCCATAGGAGAATTGGTGTATGATCACTTAATTGCACAAAAATTTAATAGCCCCCAATCTAGTTCAAGAGGCAGTGACAGTGGCTCTTCTGAGGTTCATCTTAGCAGAATGTTGCAAATTTTGAGGGAGTTTTCAGCAGAACCAATTCTCAGCATCTATGTTATTGATGATGTTTGGGAATACATGAAAGCAATGAAGGATTGGAAGTGTATTATTTCCATGCTCCTGGATGAGAATCCACTAATTGAGCTTACCGATGATGATGCAACAAATTTGGTTAGACTCCTTTCTGCATCTGTCAGAAAGGCTGTAGGAGAGAGGATTGTTCCAGCTTCGGATACTCGAAAGCAATATTACAATAAAGCTCAGAAAGAAATATTTGAAAACAATAGACGACACATAACAATTGCAATGATGAAGAACTACCCATTACTTCTCCGCAAATTTATGGCTGACAAAGCAAAAGTTCCATCATTGGTTGAGATCATTGTTCATATGAACCTAGGGAAAGCAAAAGTTCCATCATTGGTTGAGATCATTGTTCATATGAACCTAGGGCTTTATTCCTTAAAGAGGCAGGAGAATAATTTCAAAAATGTCCTTCAGCTCATGAAACAGGCTTTTTTAAAACATGGTGACAAGGAAGCGCTGAGATCTTGTGTGAAGGCTATTAAGTTCTGTTCCACTGAGAGTCAAGGCGAGCTGAAAGATTATGCTCTAAATAAATTGAAGAATCTTGAAGATGAACTTAATGATAAGCTTAAGTCTGCAATGAAAGAAGCAGCAGATGGTGATGAATATTCTCTGCTTGTGAATTTGAAAAGGTTATATGAGCTTCAGTTGTCATGGTCTGTACCTATTGAGAGCTTATACGAGGATATTGTTAAGGTTCTCCACAGTTTTAGAAATGTGGATGATGAGGTTGTCAGTTTTCTTCTTCTCAATATGTATTTGCATGTAGCCTGGACACTGCAGTCTATTGTAAATAGTGAAACTGTCTCTGAAGCATCCTTAACCTCTCTACTGTCGAAACGCAATTCCTTGTTTGAGGAACTTGAGTATTTTCTTGGTACCCCTTCTGAAGACAAGGAAGGGAGCAAATGTGGAAATCAGCTAGCTTGTAGAGTTTGTATTATACTTGCAGAAGCATGGTGTTTGTTTAGAAAGGCAAATTTTTCTTCAACAAAGCTCGAACATCTAGGATATTGTCCAGATACATCTGTTCTACAAAGGTTCTGGAAACTTTGTGAACAACAGTTAAATATTTCAGATGAGACAGAAGATGATGACACAAAGAAAGAGTACATTGAGGAGACAAACAGAGATGCAGTTATGATAGCTTCAGCAAAGTTGGTAGTTAGCAATGCAGTTCCCAAGGAATATCTTACTCCGGAGATCATTTCTCACTTTGGGATGCATGGAACAAGTGTTGCAGAGATAGTCAAGCATCTAATCACTGTCATAAAGAAAAATGATGATTTTCCAAACATTTTCATAGAAGCATTGAAAAGGGCTTATGATCGGCATCTAGTGGATCTTTCCAAAAGTGATGACAAATCTTTCACTAGCAAATCTTTTCTAGAGTGCAAGGATCTTGCTACTAGACTTTCTGGGACATTCATGGGTGCTGCTCGGAACAAGCATAAATCTGATATTCTAAAAATTGTCAGGGATGGTATTGAATATGCTTTCTTAGATGCTCCAAAACAGCTCTCTTTTCTGGAAGGTACCGTGGTTCACTTTGTGCCCAAGCTTCCCGTGATTGACACCCTGGAAATTCTAAAGGATGTCCAAAGCCGGACAGAGAATGTAAACACCGATGAAGATCCCAGTGGCTGGCGCCCTTACCACACGTTTGTTGACAGTTTACGAGAGAAGTATGTGAAGAATGAAGGTTTGCCAGATGAGAAAGAGAGGAGACGCAGTGGTCGTCCAAGGAAGCGGCGTAATATAGAGGGAAAGAGATTGTTTGATGAGGAAAGTTCAAGTGAAGAAGAGGATTCAATTAGTGGATCAGATCGAGAAGATGCTCATGATGAAGAAGAGAAACAGGAAGAGGAGGAAGAGGAAGAGGCTCCTTTGATACATTCGATTAGGTCATCATCCAAGTTGAGGTCATTGAAACTTTCAAGAGATGAAAACAAAGGCCAGAGGAAAGGAGTTTCGGCTTCTAGAACATCAGGGCCATCAAGCTAG

Protein:   MDDHPETSRNRSKRKRSKTETEERTSDANEEVEERGDDFEEVRPKSKRNRAAKDATSPAVLNPDQSLIDVIKGNEIQIPQVVKLWVERYEKDPKQAMVELLTTLFEACGAKYRIKKELLDETDVDDVVVALVNLARNGEVEDYQGSKRKDFKNFKDNLLSFWDSLIAECQDGPLFDKMLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVTSFITVAKALGAQRETTQRQLNAENKKRTEGPRLESLNKRLXDKILVLEEMMRKIFSGLFVHRYRDIDPNIRTSCIESLGVWVLSYPSLFLQDLYLKYLGWTLNDKNAGVRKASVHALQKLYDADDNVPTLGLFTERFSNRMIELADDSDVSVAVCAIGLVKQLLRHQLLPDDDLGPLYDLLIDDPAEVRRAIGELVYDHLIAQKFNSPQSSSRGSDSGSSEVHLSRMLQILREFSAEPILSIYVIDDVWEYMKAMKDWKCIISMLLDENPLIELTDDDATNLVRLLSASVRKAVGERIVPASDTRKQYYNKAQKEIFENNRRHITIAMMKNYPLLLRKFMADKAKVPSLVEIIVHMNLGKAKVPSLVEIIVHMNLGLYSLKRQENNFKNVLQLMKQAFLKHGDKEALRSCVKAIKFCSTESQGELKDYALNKLKNLEDELNDKLKSAMKEAADGDEYSLLVNLKRLYELQLSWSVPIESLYEDIVKVLHSFRNVDDEVVSFLLLNMYLHVAWTLQSIVNSETVSEASLTSLLSKRNSLFEELEYFLGTPSEDKEGSKCGNQLACRVCIILAEAWCLFRKANFSSTKLEHLGYCPDTSVLQRFWKLCEQQLNISDETEDDDTKKEYIEETNRDAVMIASAKLVVSNAVPKEYLTPEIISHFGMHGTSVAEIVKHLITVIKKNDDFPNIFIEALKRAYDRHLVDLSKSDDKSFTSKSFLECKDLATRLSGTFMGAARNKHKSDILKIVRDGIEYAFLDAPKQLSFLEGTVVHFVPKLPVIDTLEILKDVQSRTENVNTDEDPSGWRPYHTFVDSLREKYVKNEGLPDEKERRRSGRPRKRRNIEGKRLFDEESSSEEEDSISGSDREDAHDEEEKQEEEEEEEAPLIHSIRSSSKLRSLKLSRDENKGQRKGVSASRTSGPSS